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BPSL0157 BPSL0157 BPSL0152 BPSL0152 BPSL0156 BPSL0156 BPSL0151 BPSL0151 BPSL0153 BPSL0153 BPSL0154 BPSL0154 BPSL0155 BPSL0155 sucD sucD BPSL0316 BPSL0316 BPSL0150 BPSL0150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0157Similar to Brucella abortus modification methylase CcrM SWALL:MTB1_BRUAB (SWALL:O30570) (377 aa) fasta scores: E(): 4.1e-06, 31.66% id in 259 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 1.3e-37, 47.21% id in 233 aa. Similar to BPSS1077, 95.926% identity (95.926% ungapped) in 270 aa overlap; Belongs to the N(4)/N(6)-methyltransferase family. (252 aa)    
Predicted Functional Partners:
BPSL0152
Phage-related tail fiber protein; No significant database matches to the full length CDS. N-terminal region is similar to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail fiber protein Orf8 SWALL:AAM42256 (EMBL:AE012412) (401 aa) fasta scores: E(): 9e-20, 31.07% id in 399 aa. C-terminus is similar to the C-terminal region of Escherichia coli side tail fiber protein homolog from lambdoid prophage RAC StfR SWALL:STFR_ECOLI (SWALL:P76072) (1120 aa) fasta scores: E(): 0.02, 25.6% id in 578 aa. Similar to BPSS1082, 98.348% identity (98.348% ungapped) in 787 aa overlap.
 
    0.584
BPSL0156
Similar to bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 4.3e-14, 34.93% id in 229 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related baseplate protein V SWALL:AAM42258 (EMBL:AE012413) (187 aa) fasta scores: E(): 2.8e-16, 36.46% id in 181 aa. Similar to BPSS1078, 96.903% identity (96.903% ungapped) in 226 aa overlap.
       0.521
BPSL0151
N-terminus is similar to bacteriophage lambda tail fiber assembly protein Tfa SWALL:TFA_LAMBD (SWALL:P03740) (194 aa) fasta scores: E(): 0.011, 27.89% id in 190 aa, and to the N-terminal region of Ralstonia solanacearum putative tail fiber assembly-like protein rsc1920 or rs03489 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 3.5e-09, 41.73% id in 115 aa. Similar to BPSS1083, 97.758% identity (97.758% ungapped) in 223 aa overlap.
     
 0.520
BPSL0153
Putative phage protein; Similar to bacteriophage phi CTX Orf19 protein SWALL:Q9ZXK7 (EMBL:AB008550) (178 aa) fasta scores: E(): 4.7e-15, 37.83% id in 148 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein I SWALL:AAM37503 (EMBL:AE011905) (180 aa) fasta scores: E(): 3.5e-30, 50.29% id in 171 aa. Similar to BPSS1081, 99.457% identity (99.457% ungapped) in 184 aa overlap.
       0.512
BPSL0154
Similar to bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 2.4e-45, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein STY3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2.3e-48, 49.66% id in 296 aa. Similar to BPSS1080, 95.017% identity (95.017% ungapped) in 301 aa overlap.
       0.511
BPSL0155
Similar to bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 9.9e-12, 36.28% id in 113 aa, and to bacteriophage phi CTX Orf17 protein SWALL:Q9ZXK9 (EMBL:AB008550) (114 aa) fasta scores: E(): 1.1e-15, 43.59% id in 117 aa. Similar to BPSS1079, 99.167% identity (99.167% ungapped) in 120 aa overlap.
       0.511
sucD
succinyl-CoA ligase alpha-chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
    0.433
BPSL0316
Hypothetical protein; Poor database matches. C-terminal region is similar to Ralstonia solanacearum putative oxidoreductase protein rsc0156 or rs01026 SWALL:Q8Y325 (EMBL:AL646057) (267 aa) fasta scores: E(): 4.1e-14, 44.96% id in 258 aa. Possible alternative translational start site.
  
     0.430
BPSL0150
Similar to bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.1e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 3.1e-100, 67.26% id in 388 aa. Identical to BPSS1084, 100.000% identity (100.000% ungapped) in 390 aa overlap.
  
    0.419
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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